Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs17609956 chr4:147773519 C/T 1.91E-5 527 40 37.77 11.47 KM Plot
KIRC rs17633041 chr6:130436076 G/A 1.68E-5 518 38.98 43.8 7.4 KM Plot
KIRC rs17656106 chr4:147773853 T/C 1.81E-5 527 40 37.77 11.47 KM Plot
KIRC rs17705246 chr6:130419434 G/A 1.54E-5 524 39.2 43.8 7.4 KM Plot
KIRC rs17705725 chr6:130437344 T/C 1.64E-5 519 39 43.8 7.4 KM Plot
KIRC rs17759656 chr6:130405923 C/T 1.66E-5 521 39.38 43.68 7.4 KM Plot
KIRC rs17767995 chr21:44299148 C/T 3.25E-13 523 42.75 32.42 3.37 KM Plot
KIRC rs17786132 chr3:48249420 C/G 5.88E-5 512 39.7 41.27 21.12 KM Plot
KIRC rs17816084 chr6:130405838 G/A 1.66E-5 521 39.38 43.68 7.4 KM Plot
KIRC rs180685697 chr2:67532511 G/A 1.98E-7 523 39.85 37.73 2.03 KM Plot
KIRC rs182226900 chr11:1277272 C/T 5.55E-16 521 41 34.47 1.97 KM Plot
KIRC rs1926910 chr1:56268561 C/G 3.95E-5 527 10.37 46.13 37.77 KM Plot
KIRC rs1932103 chr6:130420052 G/A 1.54E-5 524 39.2 43.8 7.4 KM Plot
KIRC rs1988943 chr12:29442332 A/T 4.59E-8 520 40.8 37.9 6.07 KM Plot
KIRC rs1992581 chr4:186340863 T/C 8.81E-7 524 3.53 40 39.38 KM Plot